LOC_Os03g04060.1

Description : Chitinase 11 OS=Oryza sativa subsp. japonica (sp|q10s66|chi11_orysj : 467.0)

Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000335 (LandPlants) Phylogenetic Tree(s): OG_05_0000335_tree ,
OG_06_0000542 (SeedPlants) Phylogenetic Tree(s): OG_06_0000542_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g04060.1
Cluster	HCCA: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00243300	evm_27.TU.AmTr_v1...	Endochitinase A2 OS=Pisum sativum	0.03	Archaeplastida
AMTR_s00001p00243570	evm_27.TU.AmTr_v1...	Basic 30 kDa endochitinase OS=Solanum lycopersicum	0.05	Archaeplastida
AMTR_s00001p00243680	evm_27.TU.AmTr_v1...	Chitinase 3 OS=Oryza sativa subsp. japonica	0.04	Archaeplastida
AMTR_s00001p00243780	evm_27.TU.AmTr_v1...	Endochitinase A2 OS=Pisum sativum	0.04	Archaeplastida
AMTR_s00045p00134660	evm_27.TU.AmTr_v1...	Chitinase 10 OS=Oryza sativa subsp. japonica	0.02	Archaeplastida
AMTR_s00066p00199730	evm_27.TU.AmTr_v1...	Endochitinase EP3 OS=Arabidopsis thaliana	0.04	Archaeplastida
AT2G43570	CHI	chitinase, putative	0.04	Archaeplastida
AT2G43610	No alias	Chitinase family protein	0.05	Archaeplastida
AT2G43620	No alias	Chitinase family protein	0.03	Archaeplastida
AT3G16920	CTL2, ATCTL2	chitinase-like protein 2	0.03	Archaeplastida
AT3G47540	No alias	Chitinase family protein	0.04	Archaeplastida
AT3G54420	ATEP3, EP3,...	homolog of carrot EP3-3 chitinase	0.03	Archaeplastida
AT4G01700	No alias	Chitinase family protein	0.04	Archaeplastida
GSVIVT01007190001	No alias	Basic endochitinase OS=Vitis vinifera	0.03	Archaeplastida
GSVIVT01035029001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.04	Archaeplastida
GSVIVT01038108001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01038111001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01038120001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01038126001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.02	Archaeplastida
Gb_02223	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Gb_03375	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Gb_03376	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Gb_07463	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_20314	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Gb_20766	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_20767	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_29991	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_29992	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_29993	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Gb_34557	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Gb_34558	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
LOC_Os05g04690.1	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os06g51050.1	No alias	Chitinase 3 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os10g39680.1	No alias	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
LOC_Os10g39700.1	No alias	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.01	Archaeplastida
MA_102538g0010	No alias	Endochitinase A OS=Zea mays (sp\|p29022\|chia_maize : 100.0)	0.03	Archaeplastida
MA_10313114g0010	No alias	Endochitinase B OS=Nicotiana tabacum...	0.03	Archaeplastida
MA_10425967g0010	No alias	Basic endochitinase OS=Vitis vinifera...	0.03	Archaeplastida
MA_10427514g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_10430424g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_10435326g0010	No alias	Endochitinase EP3 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_18470g0020	No alias	Endochitinase A2 OS=Pisum sativum (sp\|p21226\|chi2_pea : 201.0)	0.02	Archaeplastida
MA_191308g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_295712g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_3814373g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_448160g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
MA_4984466g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_5970350g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_8921185g0010	No alias	Basic endochitinase C OS=Secale cereale...	0.04	Archaeplastida
MA_9376357g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Mp4g20440.1	No alias	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 235.0)	0.03	Archaeplastida
Mp5g21830.1	No alias	Endochitinase CH25 OS=Brassica napus...	0.01	Archaeplastida
Pp3c26_2880V3.1	No alias	Chitinase family protein	0.02	Archaeplastida
Smo139127	No alias	No description available	0.02	Archaeplastida
Solyc02g061770.4.1	No alias	Basic endochitinase (Fragment) OS=Solanum lycopersicum...	0.03	Archaeplastida
Solyc02g082920.4.1	No alias	Acidic 26 kDa endochitinase OS=Solanum lycopersicum...	0.04	Archaeplastida
Solyc02g082930.3.1	No alias	Acidic 27 kDa endochitinase OS=Solanum lycopersicum...	0.05	Archaeplastida
Solyc02g082960.3.1	No alias	Basic endochitinase (Fragment) OS=Solanum lycopersicum...	0.03	Archaeplastida
Solyc04g072000.4.1	No alias	Endochitinase EP3 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc06g053380.3.1	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Solyc10g055800.2.1	No alias	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.04	Archaeplastida
Solyc10g055810.2.1	No alias	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.04	Archaeplastida
Solyc10g074390.1.1	No alias	Endochitinase A OS=Nicotiana tabacum...	0.02	Archaeplastida
Solyc12g098810.2.1	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.04	Archaeplastida
Zm00001e002252_P001	No alias	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
Zm00001e015056_P001	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Zm00001e027534_P001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Zm00001e030151_P001	No alias	Chitinase 1 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Zm00001e030152_P001	No alias	Basic endochitinase A OS=Secale cereale...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0042737	drug catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0004556	alpha-amylase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	30	247

External Links

No external refs found!

LOC_Os03g04060.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation