1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g04310.1

LOC_Os03g04310.1


Description : transcription factor (bHLH)


Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0003886 (LandPlants) Phylogenetic Tree(s): OG_05_0003886_tree ,
OG_06_0002813 (SeedPlants) Phylogenetic Tree(s): OG_06_0002813_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g04310.1
Cluster HCCA: Cluster_322

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00170610 evm_27.TU.AmTr_v1... External stimuli response.temperature.ICE-CBF cold... 0.03 Archaeplastida
AMTR_s00184p00048850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Gb_05276 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_26391 No alias transcription factor (bHLH) 0.02 Archaeplastida
Gb_36380 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os04g23440.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
MA_12807g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_57676g0010 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.04 Archaeplastida
MA_63506g0010 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.02 Archaeplastida
Mp2g02460.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Pp3c18_19850V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
Pp3c1_20960V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c2_16410V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c8_18070V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
Solyc06g051550.4.1 No alias transcription factor (bHLH). iron uptake transcription factor FIT 0.05 Archaeplastida
Solyc08g062780.2.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e013304_P003 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 185 227
No external refs found!