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  5. LOC_Os03g05280.1

LOC_Os03g05280.1


Description : C-class RAB GTPase


Gene families : OG0002122 (Archaeplastida) Phylogenetic Tree(s): OG0002122_tree ,
OG_05_0001760 (LandPlants) Phylogenetic Tree(s): OG_05_0001760_tree ,
OG_06_0001692 (SeedPlants) Phylogenetic Tree(s): OG_06_0001692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g05280.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Pp3c5_3390V3.1 No alias RAB GTPASE HOMOLOG B18 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004146 dihydrofolate reductase activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006760 folic acid-containing compound metabolic process IEP Neighborhood
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
BP GO:0046653 tetrahydrofolate metabolic process IEP Neighborhood
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 177
No external refs found!