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  5. LOC_Os03g05500.1

LOC_Os03g05500.1


Description : transcription factor (AS2/LOB)


Gene families : OG0000938 (Archaeplastida) Phylogenetic Tree(s): OG0000938_tree ,
OG_05_0000559 (LandPlants) Phylogenetic Tree(s): OG_05_0000559_tree ,
OG_06_0000336 (SeedPlants) Phylogenetic Tree(s): OG_06_0000336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g05500.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AT2G42440 No alias Lateral organ boundaries (LOB) domain family protein 0.05 Archaeplastida
AT3G03760 LBD20 LOB domain-containing protein 20 0.05 Archaeplastida
AT3G58190 LBD29, ASL16 lateral organ boundaries-domain 29 0.03 Archaeplastida
AT4G00220 LBD30, JLO Lateral organ boundaries (LOB) domain family protein 0.04 Archaeplastida
AT5G06080 LBD33 LOB domain-containing protein 33 0.03 Archaeplastida
GSVIVT01027620001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01029979001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
Gb_14010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_39343 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os03g14270.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os10g07510.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
MA_126761g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_8060019g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp8g11560.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc01g091400.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc01g091420.2.1 No alias transcription factor (AS2/LOB) 0.07 Archaeplastida
Solyc06g083930.2.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Solyc09g066260.4.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc09g066270.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e000390_P001 No alias transcription factor (AS2/LOB) 0.11 Archaeplastida
Zm00001e000391_P001 No alias transcription factor (AS2/LOB) 0.08 Archaeplastida
Zm00001e001031_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e019686_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e042347_P001 No alias transcription factor (AS2/LOB) 0.08 Archaeplastida
Zm00001e042443_P001 No alias transcription factor (AS2/LOB) 0.08 Archaeplastida
Zm00001e042444_P001 No alias transcription factor (AS2/LOB) 0.11 Archaeplastida
Zm00001e042448_P001 No alias transcription factor (AS2/LOB) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 13 111
No external refs found!