LOC_Os03g05730.1

Description : platform ATPase (CDC48)

Gene families : OG0000169 (Archaeplastida) Phylogenetic Tree(s): OG0000169_tree ,
OG_05_0001221 (LandPlants) Phylogenetic Tree(s): OG_05_0001221_tree ,
OG_06_0001614 (SeedPlants) Phylogenetic Tree(s): OG_06_0001614_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g05730.1
Cluster	HCCA: Cluster_298

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00072p00117380	evm_27.TU.AmTr_v1...	Cell division control protein 48 homolog D...	0.02	Archaeplastida
AMTR_s00085p00052820	evm_27.TU.AmTr_v1...	Cell division cycle protein 48 homolog OS=Glycine max	0.04	Archaeplastida
GSVIVT01025783001	No alias	Calmodulin-interacting protein 111 OS=Arabidopsis thaliana	0.03	Archaeplastida
MA_10168585g0010	No alias	platform ATPase (CDC48)	0.04	Archaeplastida
MA_10430906g0010	No alias	component Pex6 of Pex1-Pex6 subcomplex	0.04	Archaeplastida
Mp1g02450.1	No alias	platform ATPase (CDC48)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Neighborhood
MF	GO:0008238	exopeptidase activity	IEP	Neighborhood
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Neighborhood
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Neighborhood
MF	GO:0070008	serine-type exopeptidase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	520	653
IPR003959	ATPase_AAA_core	247	376
IPR003338	CDC4_N-term_subdom	32	113
IPR004201	Cdc48_dom2	133	196

External Links

No external refs found!