LOC_Os03g06010.1


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g06010.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270650 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
AMTR_s00077p00060330 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00119p00058870 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.04 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.04 Archaeplastida
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 Archaeplastida
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.02 Archaeplastida
AT2G03090 EXP15, ATEXPA15,... expansin A15 0.02 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.04 Archaeplastida
AT3G03220 ATEXP13,... expansin A13 0.02 Archaeplastida
AT3G15370 ATHEXP ALPHA... expansin 12 0.06 Archaeplastida
AT3G29030 EXP5, ATHEXP... expansin A5 0.05 Archaeplastida
AT4G01630 ATHEXP ALPHA... expansin A17 0.04 Archaeplastida
AT4G38210 ATEXPA20,... expansin A20 0.04 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.06 Archaeplastida
GSVIVT01008762001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01016525001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01019965001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01024946001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01030191001 No alias Expansin-A8 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01030192001 No alias Expansin-A2 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
Gb_01048 No alias alpha-class expansin 0.03 Archaeplastida
Gb_01500 No alias alpha-class expansin 0.02 Archaeplastida
Gb_01502 No alias alpha-class expansin 0.03 Archaeplastida
Gb_04404 No alias alpha-class expansin 0.02 Archaeplastida
Gb_06127 No alias alpha-class expansin 0.03 Archaeplastida
Gb_07423 No alias alpha-class expansin 0.05 Archaeplastida
Gb_16008 No alias alpha-class expansin 0.05 Archaeplastida
Gb_20678 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os01g14650.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os05g39990.1 No alias alpha-class expansin 0.03 Archaeplastida
MA_10020g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_103404g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_10429288g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10433559g0020 No alias alpha-class expansin 0.02 Archaeplastida
MA_130258g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_14588g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_18265g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_200461g0010 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_274624g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_275115g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.06 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_4979g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_6644365g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8784268g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp1g22730.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g22740.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g24230.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g26350.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp2g18600.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g03930.1 No alias alpha-class expansin 0.05 Archaeplastida
Mp3g06900.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g09650.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09760.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09770.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g10160.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g22690.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g24470.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.03 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c14_18030V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.03 Archaeplastida
Pp3c20_5780V3.1 No alias expansin A15 0.02 Archaeplastida
Pp3c21_1850V3.1 No alias expansin A1 0.03 Archaeplastida
Pp3c22_760V3.1 No alias expansin A1 0.04 Archaeplastida
Pp3c3_16280V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.02 Archaeplastida
Smo102623 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Smo231226 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.09 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.07 Archaeplastida
Smo90935 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Smo91129 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.07 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc03g031840.3.1 No alias No annotation 0.02 Archaeplastida
Solyc04g081870.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc06g051800.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc06g076220.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Solyc08g080060.4.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc09g010860.4.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.06 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e003887_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e003888_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e003889_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e014220_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e014231_P001 No alias Expansin-A13 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e017221_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e019433_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.09 Archaeplastida
Zm00001e040578_P001 No alias alpha-class expansin 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 62 150
IPR007117 Expansin_CBD 161 238
No external refs found!