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  5. LOC_Os03g06360.1

LOC_Os03g06360.1


Description : Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum (sp|p09444|lea34_goshi : 144.0)


Gene families : OG0001382 (Archaeplastida) Phylogenetic Tree(s): OG0001382_tree ,
OG_05_0002277 (LandPlants) Phylogenetic Tree(s): OG_05_0002277_tree ,
OG_06_0002008 (SeedPlants) Phylogenetic Tree(s): OG_06_0002008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g06360.1
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AT1G03120 RAB28, ATRAB28 responsive to abscisic acid 28 0.02 Archaeplastida
AT3G22490 No alias Seed maturation protein 0.2 Archaeplastida
AT3G22500 ATECP31 Seed maturation protein 0.2 Archaeplastida
AT5G53260 No alias Seed maturation protein 0.18 Archaeplastida
AT5G53270 No alias Seed maturation protein 0.12 Archaeplastida
GSVIVT01001170001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.11 Archaeplastida
GSVIVT01017985001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.16 Archaeplastida
GSVIVT01021881001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.16 Archaeplastida
MA_14118g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_216273g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_326206g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_49897g0020 No alias no hits & (original description: none) 0.07 Archaeplastida
Mp7g06630.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.07 Archaeplastida
Pp3c25_10310V3.1 No alias Seed maturation protein 0.03 Archaeplastida
Pp3c5_27600V3.1 No alias No annotation 0.01 Archaeplastida
Pp3c6_200V3.1 No alias Seed maturation protein 0.04 Archaeplastida
Smo84789 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis thaliana 0.05 Archaeplastida
Solyc09g065360.4.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.17 Archaeplastida
Solyc09g082100.3.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.17 Archaeplastida
Solyc09g082110.4.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.18 Archaeplastida
Zm00001e000449_P001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.24 Archaeplastida
Zm00001e005665_P002 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.26 Archaeplastida
Zm00001e005666_P001 No alias no hits & (original description: none) 0.25 Archaeplastida
Zm00001e014959_P001 No alias no hits & (original description: none) 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR007011 SMP 23 77
IPR007011 SMP 215 272
IPR007011 SMP 150 205
No external refs found!