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  5. LOC_Os03g06420.1

LOC_Os03g06420.1


Description : no hits & (original description: none)


Gene families : OG0005925 (Archaeplastida) Phylogenetic Tree(s): OG0005925_tree ,
OG_05_0004291 (LandPlants) Phylogenetic Tree(s): OG_05_0004291_tree ,
OG_06_0005919 (SeedPlants) Phylogenetic Tree(s): OG_06_0005919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g06420.1
Cluster HCCA: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
Zm00001e004765_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e039007_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!