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  5. LOC_Os03g07100.1

LOC_Os03g07100.1


Description : xylogen-type arabinogalactan protein


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0000848 (SeedPlants) Phylogenetic Tree(s): OG_06_0000848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g07100.1
Cluster HCCA: Cluster_323

Target Alias Description ECC score Gene Family Method Actions
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT2G48130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
Gb_02441 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Gb_02455 No alias xylogen-type arabinogalactan protein 0.05 Archaeplastida
Gb_24349 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
MA_19325g0010 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
MA_5581g0010 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Pp3c14_3810V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
Zm00001e001521_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e028880_P001 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e033062_P001 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e038813_P001 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 8 106
No external refs found!