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  5. LOC_Os03g07330.1

LOC_Os03g07330.1


Description : Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana (sp|q9fma1|pp433_arath : 326.0)


Gene families : OG0017894 (Archaeplastida) Phylogenetic Tree(s): OG0017894_tree ,
OG_05_0001276 (LandPlants) Phylogenetic Tree(s): OG_05_0001276_tree ,
OG_06_0000902 (SeedPlants) Phylogenetic Tree(s): OG_06_0000902_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g07330.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Smo113923 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 294 318
IPR002885 Pentatricopeptide_repeat 398 422
IPR002885 Pentatricopeptide_repeat 323 351
IPR002885 Pentatricopeptide_repeat 164 191
IPR002885 Pentatricopeptide_repeat 222 265
IPR002885 Pentatricopeptide_repeat 88 132
No external refs found!