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  5. LOC_Os03g08470.1

LOC_Os03g08470.1


Description : Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica (sp|q6k7e6|erf1_orysj : 104.0)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0020347 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g08470.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00003p00133970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00006p00266920 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 Archaeplastida
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00007p00268460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00009p00148470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
AMTR_s00010p00095120 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF110... 0.03 Archaeplastida
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00021p00184450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00025p00249140 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.biosynthesis... 0.02 Archaeplastida
AMTR_s00058p00066390 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 Archaeplastida
AMTR_s00095p00096190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00115p00032780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
AMTR_s00150p00091360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G24590 DRN-LIKE, ESR2,... DORNROSCHEN-like 0.03 Archaeplastida
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G53910 RAP2.12 related to AP2 12 0.03 Archaeplastida
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G71450 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G80580 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.02 Archaeplastida
AT4G11140 CRF1 cytokinin response factor 1 0.03 Archaeplastida
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.05 Archaeplastida
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G31060 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G13330 Rap2.6L related to AP2 6l 0.04 Archaeplastida
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G50080 ERF110 ethylene response factor 110 0.03 Archaeplastida
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01001089001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01006277001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01013905001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013913001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013916001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013918001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013923001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01013935001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01014291001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01015037001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01017315001 No alias Cell wall.cutin and suberin.biosynthesis... 0.05 Archaeplastida
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01032961001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01032983001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01033793001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01035911001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01036228001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
Gb_01211 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_07474 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_12965 No alias Ethylene-responsive transcription factor ABR1... 0.03 Archaeplastida
Gb_24891 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_26856 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_32995 No alias Ethylene-responsive transcription factor ERF016... 0.02 Archaeplastida
LOC_Os01g10370.1 No alias transcription factor (DREB) 0.05 Archaeplastida
LOC_Os01g12440.1 No alias transcription factor (ERF) 0.06 Archaeplastida
LOC_Os01g21120.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os01g64790.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os02g35240.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os02g43790.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os02g43940.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os02g55380.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os03g09170.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os04g44670.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os05g28350.1 No alias transcription factor (DREB) 0.06 Archaeplastida
LOC_Os06g08340.1 No alias transcription factor (ERF) 0.06 Archaeplastida
LOC_Os06g36000.1 No alias transcription factor (DREB) 0.06 Archaeplastida
LOC_Os06g40150.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.05 Archaeplastida
LOC_Os07g47790.1 No alias transcription factor (ERF) 0.06 Archaeplastida
LOC_Os09g13940.2 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os09g39810.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os10g41130.1 No alias transcription factor (DREB) 0.05 Archaeplastida
LOC_Os10g41330.1 No alias transcription factor (ERF) 0.05 Archaeplastida
LOC_Os11g06770.2 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_10266433g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_10427743g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10431706g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_137148g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_15251g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_184464g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_18454g0020 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_364562g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_4032g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_4072g0020 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_500288g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_54341g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
MA_81029g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_8384767g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_88g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_93229g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Mp4g17430.1 No alias Ethylene-responsive transcription factor ERF112... 0.02 Archaeplastida
Mp6g08690.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Pp3c10_17870V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c16_4710V3.1 No alias ethylene response factor 7 0.03 Archaeplastida
Pp3c1_27630V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c1_7800V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c21_13130V3.1 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c25_1760V3.1 No alias related to AP2 11 0.03 Archaeplastida
Pp3c4_23930V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c4_2660V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Smo104978 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
Solyc01g005630.3.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Solyc01g065980.4.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc01g090345.1.1 No alias Ethylene-responsive transcription factor 13... 0.02 Archaeplastida
Solyc02g093130.3.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc03g006320.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc03g093550.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc03g116610.3.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Solyc03g124110.2.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 Archaeplastida
Solyc04g072300.1.1 No alias Ethylene-responsive transcription factor FZP OS=Oryza... 0.03 Archaeplastida
Solyc04g080910.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc05g050790.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc05g052040.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g063070.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc06g082590.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc08g078170.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g078190.2.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc09g089930.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc09g091950.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc10g006130.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g076380.2.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc12g038440.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e000400_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e000611_P001 No alias Ethylene-responsive transcription factor ERF073... 0.03 Archaeplastida
Zm00001e003579_P001 No alias Ethylene-responsive transcription factor ERF015... 0.04 Archaeplastida
Zm00001e003707_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e006692_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e006982_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007332_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e007350_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e014413_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e015429_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e019026_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e019837_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020274_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e022864_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e023224_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e023804_P001 No alias Ethylene-responsive transcription factor ERF013... 0.03 Archaeplastida
Zm00001e023816_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029041_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029765_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e031438_P002 No alias Ethylene-responsive transcription factor RAP2-3... 0.03 Archaeplastida
Zm00001e032032_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e033537_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e033965_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e034661_P001 No alias Ethylene-responsive transcription factor ERF115... 0.05 Archaeplastida
Zm00001e035811_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e035837_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e037404_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
Zm00001e037869_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041815_P001 No alias transcription factor (ERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0006571 tyrosine biosynthetic process IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 110 159
No external refs found!