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  5. LOC_Os03g08850.1

LOC_Os03g08850.1


Description : component TIR1/AFB of auxin receptor complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000271 (Archaeplastida) Phylogenetic Tree(s): OG0000271_tree ,
OG_05_0017733 (LandPlants) Phylogenetic Tree(s): OG_05_0017733_tree ,
OG_06_0017255 (SeedPlants) Phylogenetic Tree(s): OG_06_0017255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g08850.1
Cluster HCCA: Cluster_312

Target Alias Description ECC score Gene Family Method Actions
AT4G03190 AFB1, ATGRH1, GRH1 GRR1-like protein 1 0.02 Archaeplastida
Gb_04515 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.02 Archaeplastida
Gb_04516 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida
MA_10427099g0010 No alias Coronatine-insensitive protein homolog 1b OS=Oryza... 0.02 Archaeplastida
MA_15842g0020 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.04 Archaeplastida
Mp2g26590.1 No alias component COI of jasmonic acid receptor complex 0.03 Archaeplastida
Pp3c20_4050V3.1 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
Smo168175 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc09g074520.3.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.04 Archaeplastida
Zm00001e015908_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.05 Archaeplastida
Zm00001e023831_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.04 Archaeplastida
Zm00001e027505_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.06 Archaeplastida
Zm00001e040776_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006282 regulation of DNA repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:2001020 regulation of response to DNA damage stimulus IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!