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  5. LOC_Os03g08930.1

LOC_Os03g08930.1


Description : transcription factor (bHLH)


Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree ,
OG_06_0000646 (SeedPlants) Phylogenetic Tree(s): OG_06_0000646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g08930.1
Cluster HCCA: Cluster_339

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G22490 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
LOC_Os02g15760.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc01g080050.4.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc08g076820.3.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc11g010340.2.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e026643_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 109 160
No external refs found!