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  5. LOC_Os03g09200.1

LOC_Os03g09200.1


Description : Protein UPSTREAM OF FLC OS=Arabidopsis thaliana (sp|q9lx14|ufc_arath : 134.0)


Gene families : OG0001036 (Archaeplastida) Phylogenetic Tree(s): OG0001036_tree ,
OG_05_0000624 (LandPlants) Phylogenetic Tree(s): OG_05_0000624_tree ,
OG_06_0000863 (SeedPlants) Phylogenetic Tree(s): OG_06_0000863_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g09200.1
Cluster HCCA: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00200600 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00068p00133150 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.02 Archaeplastida
AT2G28150 No alias Domain of unknown function (DUF966) 0.04 Archaeplastida
AT5G59790 No alias Domain of unknown function (DUF966) 0.02 Archaeplastida
GSVIVT01006373001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01031468001 No alias No description available 0.05 Archaeplastida
GSVIVT01031469001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os03g48600.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10435302g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_40202g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc04g054800.3.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc11g066380.3.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e000820_P002 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e003892_P002 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0007050 cell cycle arrest IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR010369 DUF966 172 347
IPR010369 DUF966 40 148
No external refs found!