LOC_Os03g10110.1


Description : Vicilin-like seed storage protein At4g36700 OS=Arabidopsis thaliana (sp|f4jqg6|vcl43_arath : 261.0)


Gene families : OG0002434 (Archaeplastida) Phylogenetic Tree(s): OG0002434_tree ,
OG_05_0011414 (LandPlants) Phylogenetic Tree(s): OG_05_0011414_tree ,
OG_06_0011489 (SeedPlants) Phylogenetic Tree(s): OG_06_0011489_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g10110.1
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00089270 evm_27.TU.AmTr_v1... Vicilin-like seed storage protein At2g18540... 0.05 Archaeplastida
AMTR_s00080p00163630 evm_27.TU.AmTr_v1... Vicilin-like seed storage protein At2g28490... 0.03 Archaeplastida
AT2G28490 No alias RmlC-like cupins superfamily protein 0.09 Archaeplastida
AT4G36700 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
GSVIVT01019005001 No alias Vicilin-like seed storage protein At2g18540... 0.07 Archaeplastida
GSVIVT01025139001 No alias Vicilin-like seed storage protein At2g28490... 0.03 Archaeplastida
Gb_30035 No alias Vicilin-like seed storage protein At2g18540... 0.03 Archaeplastida
MA_7115598g0010 No alias Vicilin-like seed storage protein At2g28490... 0.02 Archaeplastida
MA_8072g0010 No alias Vicilin-like seed storage protein At2g28490... 0.05 Archaeplastida
Solyc02g085590.4.1 No alias Vicilin-like seed storage protein At2g18540... 0.14 Archaeplastida
Solyc06g075270.4.1 No alias Vicilin-like seed storage protein At2g28490... 0.02 Archaeplastida
Solyc11g072380.2.1 No alias Vicilin-like seed storage protein At2g28490... 0.1 Archaeplastida
Zm00001e001586_P001 No alias Vicilin-like seed storage protein At2g28490... 0.06 Archaeplastida
Zm00001e038790_P005 No alias Vicilin-like seed storage protein At2g18540... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 322 494
No external refs found!