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  5. LOC_Os03g10870.1

LOC_Os03g10870.1


Description : CASP-like protein 5A1 OS=Oryza sativa subsp. japonica (sp|q10q78|csplv_orysj : 245.0)


Gene families : OG0000968 (Archaeplastida) Phylogenetic Tree(s): OG0000968_tree ,
OG_05_0001200 (LandPlants) Phylogenetic Tree(s): OG_05_0001200_tree ,
OG_06_0004539 (SeedPlants) Phylogenetic Tree(s): OG_06_0004539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g10870.1
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
AMTR_s01228p00010510 evm_27.TU.AmTr_v1... CASP-like protein 5A1 OS=Ginkgo biloba 0.03 Archaeplastida
GSVIVT01016270001 No alias CASP-like protein 5A2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Pp3c16_4800V3.1 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
Zm00001e012905_P002 No alias CASP-like protein 5A3 OS=Zea mays (sp|b4fns3|csplk_maize : 190.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 35 163
No external refs found!