LOC_Os03g11550.1


Description : transcriptional co-repressor (AFP/NINJA)


Gene families : OG0000721 (Archaeplastida) Phylogenetic Tree(s): OG0000721_tree ,
OG_05_0000424 (LandPlants) Phylogenetic Tree(s): OG_05_0000424_tree ,
OG_06_0000404 (SeedPlants) Phylogenetic Tree(s): OG_06_0000404_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g11550.1
Cluster HCCA: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
AT3G29575 AFP3 ABI five binding protein 3 0.05 Archaeplastida
GSVIVT01003927001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.07 Archaeplastida
GSVIVT01012225001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.03 Archaeplastida
MA_16384g0010 No alias transcriptional co-repressor (AFP/NINJA) 0.11 Archaeplastida
MA_2575g0010 No alias transcriptional co-repressor (AFP/NINJA) 0.03 Archaeplastida
Smo446487 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.01 Archaeplastida
Solyc02g030633.1.1 No alias transcriptional co-repressor (AFP/NINJA) 0.06 Archaeplastida
Solyc04g005380.3.1 No alias transcriptional co-repressor (AFP/NINJA) 0.09 Archaeplastida
Zm00001e035495_P001 No alias transcriptional co-repressor (AFP/NINJA) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032310 NINJA_B 145 233
IPR012463 Ninja_motif 30 63
IPR032308 Jas 327 392
No external refs found!