LOC_Os03g12370.1


Description : transcription factor (HSF)


Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0017726 (LandPlants) Phylogenetic Tree(s): OG_05_0017726_tree ,
OG_06_0017245 (SeedPlants) Phylogenetic Tree(s): OG_06_0017245_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g12370.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00262410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 Archaeplastida
AMTR_s00132p00118400 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 Archaeplastida
AT1G67970 HSFA8, AT-HSFA8 heat shock transcription factor A8 0.02 Archaeplastida
AT5G45710 HSFA4C, RHA1, AT-HSFA4C winged-helix DNA-binding transcription factor family protein 0.04 Archaeplastida
AT5G62020 AT-HSFB2A, HSFB2A heat shock transcription factor B2A 0.05 Archaeplastida
GSVIVT01020781001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 Archaeplastida
GSVIVT01021269001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 Archaeplastida
GSVIVT01022134001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 Archaeplastida
MA_10293408g0010 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.03 Archaeplastida
MA_10432269g0010 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.02 Archaeplastida
MA_43896g0010 No alias Heat stress transcription factor A-1 OS=Oryza sativa... 0.07 Archaeplastida
MA_5374g0010 No alias transcription factor (HSF) 0.03 Archaeplastida
Smo93081 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 Archaeplastida
Solyc02g090820.3.1 No alias transcription factor (HSF) 0.02 Archaeplastida
Solyc03g006000.3.1 No alias transcription factor (HSF) 0.08 Archaeplastida
Solyc09g059520.3.1 No alias transcription factor (HSF) 0.03 Archaeplastida
Zm00001e000890_P002 No alias transcription factor (HSF) 0.03 Archaeplastida
Zm00001e006405_P001 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.02 Archaeplastida
Zm00001e011633_P001 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.04 Archaeplastida
Zm00001e014583_P001 No alias transcription factor (HSF) 0.04 Archaeplastida
Zm00001e027464_P001 No alias transcription factor (HSF) 0.03 Archaeplastida
Zm00001e029052_P001 No alias transcription factor (HSF) 0.04 Archaeplastida
Zm00001e038685_P001 No alias transcription factor (HSF) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005047 signal recognition particle binding IEP Neighborhood
CC GO:0005785 signal recognition particle receptor complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 51 139
No external refs found!