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  5. LOC_Os03g12530.1

LOC_Os03g12530.1


Description : manganese cation transporter (Mn-CDF)


Gene families : OG0000769 (Archaeplastida) Phylogenetic Tree(s): OG0000769_tree ,
OG_05_0003956 (LandPlants) Phylogenetic Tree(s): OG_05_0003956_tree ,
OG_06_0004374 (SeedPlants) Phylogenetic Tree(s): OG_06_0004374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g12530.1
Cluster HCCA: Cluster_671

Target Alias Description ECC score Gene Family Method Actions
Smo96683 No alias Solute transport.carrier-mediated transport.CDF... 0.02 Archaeplastida
Solyc12g017340.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc12g017350.2.1 No alias manganese cation transporter (Mn-CDF) 0.03 Archaeplastida
Solyc12g100300.2.1 No alias manganese cation transporter (Mn-CDF) 0.03 Archaeplastida
Zm00001e019356_P001 No alias manganese cation transporter (Mn-CDF) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA Interproscan
MF GO:0008324 cation transmembrane transporter activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR027470 Cation_efflux_CTD 302 377
IPR002524 Cation_efflux 105 297
No external refs found!