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  5. LOC_Os03g13590.1

LOC_Os03g13590.1


Description : no description available(sp|q10pc5|tta1_orysj : 1188.0)


Gene families : OG0001005 (Archaeplastida) Phylogenetic Tree(s): OG0001005_tree ,
OG_05_0000637 (LandPlants) Phylogenetic Tree(s): OG_05_0000637_tree ,
OG_06_0001521 (SeedPlants) Phylogenetic Tree(s): OG_06_0001521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g13590.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00013500 evm_27.TU.AmTr_v1... Protein OBERON 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00103p00104550 evm_27.TU.AmTr_v1... Protein OBERON 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G14740 No alias Protein of unknown function (DUF1423) 0.03 Archaeplastida
AT3G63500 No alias Protein of unknown function (DUF1423) 0.04 Archaeplastida
GSVIVT01011608001 No alias No description available 0.04 Archaeplastida
MA_10294074g0010 No alias no description available(sp|q10pc5|tta1_orysj : 312.0) 0.03 Archaeplastida
MA_105216g0010 No alias Protein OBERON 3 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_8062g0010 No alias no description available(sp|q10pc5|tta1_orysj : 115.0) 0.03 Archaeplastida
Mp1g16320.1 No alias OBERON-like protein OS=Nicotiana benthamiana... 0.04 Archaeplastida
Smo158800 No alias OBERON-like protein OS=Nicotiana benthamiana 0.08 Archaeplastida
Smo70453 No alias Protein OBERON 1 OS=Arabidopsis thaliana 0.07 Archaeplastida
Solyc01g087490.4.1 No alias Protein OBERON 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc05g018500.3.1 No alias Protein OBERON 3 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Solyc07g047780.3.1 No alias OBERON-like protein OS=Nicotiana benthamiana... 0.07 Archaeplastida
Zm00001e000995_P002 No alias no description available(sp|q10pc5|tta1_orysj : 940.0) 0.08 Archaeplastida
Zm00001e011323_P001 No alias OBERON-like protein OS=Nicotiana benthamiana... 0.04 Archaeplastida
Zm00001e015252_P001 No alias OBERON-like protein OS=Nicotiana benthamiana... 0.04 Archaeplastida
Zm00001e038618_P001 No alias no description available(sp|q10pc5|tta1_orysj : 941.0) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004788 thiamine diphosphokinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030975 thiamine binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042357 thiamine diphosphate metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR032881 Oberon_PHD 378 501
IPR032535 Oberon_cc 606 716
No external refs found!