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  5. LOC_Os03g13600.2

LOC_Os03g13600.2


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0002182 (SeedPlants) Phylogenetic Tree(s): OG_06_0002182_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g13600.2
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AT1G24625 ZFP7 zinc finger protein 7 0.03 Archaeplastida
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.02 Archaeplastida
GSVIVT01037897001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
LOC_Os03g11680.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_48488g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c11_13030V3.1 No alias zinc-finger protein 10 0.02 Archaeplastida
Zm00001e005916_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e017009_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e017991_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e025746_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!