1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g13790.2

LOC_Os03g13790.2


Description : transcription factor (MYB-related)


Gene families : OG0003424 (Archaeplastida) Phylogenetic Tree(s): OG0003424_tree ,
OG_05_0004899 (LandPlants) Phylogenetic Tree(s): OG_05_0004899_tree ,
OG_06_0006176 (SeedPlants) Phylogenetic Tree(s): OG_06_0006176_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g13790.2
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
MA_116893g0020 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Mp7g13240.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc04g051450.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc09g008100.4.1 No alias transcription factor (MYB-related) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
CC GO:0071203 WASH complex IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 56
No external refs found!