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  5. LOC_Os03g16150.2

LOC_Os03g16150.2


Description : GDP-D-mannose pyrophosphorylase (VTC1). GDP-D-mannose pyrophosphorylase (VTC1)


Gene families : OG0002231 (Archaeplastida) Phylogenetic Tree(s): OG0002231_tree ,
OG_05_0002162 (LandPlants) Phylogenetic Tree(s): OG_05_0002162_tree ,
OG_06_0002240 (SeedPlants) Phylogenetic Tree(s): OG_06_0002240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g16150.2
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AT2G39770 EMB101, VTC1,... Glucose-1-phosphate adenylyltransferase family protein 0.02 Archaeplastida
Cre16.g672800 No alias Redox homeostasis.low-molecular-weight... 0.04 Archaeplastida
Gb_41514 No alias GDP-D-mannose pyrophosphorylase (VTC1). GDP-D-mannose... 0.03 Archaeplastida
MA_106343g0010 No alias GDP-D-mannose pyrophosphorylase (VTC1). GDP-D-mannose... 0.02 Archaeplastida
Solyc03g096730.3.1 No alias GDP-D-mannose pyrophosphorylase (VTC1). GDP-D-mannose... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001451 Hexapep 261 295
IPR005835 NTP_transferase_dom 2 229
No external refs found!