Description : E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana (sp|q940t5|rduf2_arath : 187.0)
Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0004757 (LandPlants) Phylogenetic Tree(s): OG_05_0004757_tree ,
OG_06_0002639 (SeedPlants) Phylogenetic Tree(s): OG_06_0002639_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os03g16480.1 | |
Cluster | HCCA: Cluster_355 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00012p00250160 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | Archaeplastida | |
AT3G13430 | No alias | RING/U-box superfamily protein | 0.05 | Archaeplastida | |
AT3G46620 | No alias | zinc finger (C3HC4-type RING finger) family protein | 0.04 | Archaeplastida | |
AT5G01980 | No alias | RING/U-box superfamily protein | 0.04 | Archaeplastida | |
AT5G59550 | No alias | zinc finger (C3HC4-type RING finger) family protein | 0.07 | Archaeplastida | |
GSVIVT01019972001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | Archaeplastida | |
GSVIVT01024920001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | Archaeplastida | |
Gb_22125 | No alias | E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... | 0.03 | Archaeplastida | |
LOC_Os01g44240.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
LOC_Os05g01940.1 | No alias | elicitor peptide precursor (proPEP) | 0.03 | Archaeplastida | |
LOC_Os09g17610.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
LOC_Os11g37230.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
MA_3413240g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_55505g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_79051g0010 | No alias | E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... | 0.02 | Archaeplastida | |
Mp3g17850.1 | No alias | E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... | 0.02 | Archaeplastida | |
Mp7g15970.1 | No alias | E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... | 0.02 | Archaeplastida | |
Pp3c7_560V3.1 | No alias | RING/U-box superfamily protein | 0.04 | Archaeplastida | |
Solyc01g009000.3.1 | No alias | Probable E3 ubiquitin-protein ligase RHC1A... | 0.04 | Archaeplastida | |
Solyc01g050040.4.1 | No alias | E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... | 0.04 | Archaeplastida | |
Solyc06g005650.2.1 | No alias | E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... | 0.04 | Archaeplastida | |
Solyc07g007160.3.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Solyc07g055330.3.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e001202_P001 | No alias | E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... | 0.03 | Archaeplastida | |
Zm00001e003411_P001 | No alias | E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
Zm00001e016135_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Zm00001e029660_P001 | No alias | E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis... | 0.04 | Archaeplastida | |
Zm00001e031979_P001 | No alias | E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... | 0.02 | Archaeplastida | |
Zm00001e037527_P001 | No alias | E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
Zm00001e038273_P001 | No alias | E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... | 0.03 | Archaeplastida | |
Zm00001e038493_P001 | No alias | E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... | 0.02 | Archaeplastida | |
Zm00001e039308_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0061630 | ubiquitin protein ligase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000813 | ESCRT I complex | IEP | Neighborhood |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Neighborhood |
CC | GO:0005787 | signal peptidase complex | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006465 | signal peptide processing | IEP | Neighborhood |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Neighborhood |
BP | GO:0006790 | sulfur compound metabolic process | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0016197 | endosomal transport | IEP | Neighborhood |
BP | GO:0016485 | protein processing | IEP | Neighborhood |
BP | GO:0016567 | protein ubiquitination | IEP | Neighborhood |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Neighborhood |
BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
CC | GO:0036452 | ESCRT complex | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044432 | endoplasmic reticulum part | IEP | Neighborhood |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
CC | GO:0044440 | endosomal part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Neighborhood |
BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0051604 | protein maturation | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0065007 | biological regulation | IEP | Neighborhood |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
BP | GO:0071985 | multivesicular body sorting pathway | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
CC | GO:1905368 | peptidase complex | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No external refs found! |