AMTR_s00003p00256250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.313

Description : Santalene and bergamotene synthase, chloroplastic OS=Solanum habrochaites


Gene families : OG0002410 (Archaeplastida) Phylogenetic Tree(s): OG0002410_tree ,
OG_05_0001597 (LandPlants) Phylogenetic Tree(s): OG_05_0001597_tree ,
OG_06_0000711 (SeedPlants) Phylogenetic Tree(s): OG_06_0000711_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00256250
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00256260 evm_27.TU.AmTr_v1... (13E)-labda-7,13-dien-15-ol synthase OS=Selaginella... 0.03 Archaeplastida
Gb_05029 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.02 Archaeplastida
Gb_13713 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.03 Archaeplastida
Gb_35203 No alias mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.02 Archaeplastida
Gb_36202 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.01 Archaeplastida
Gb_38697 No alias mono-/sesquiterpene-/diterpene synthase 0.02 Archaeplastida
Gb_39616 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.03 Archaeplastida
MA_10435568g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_152325g0010 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP Neighborhood
MF GO:0005342 organic acid transmembrane transporter activity IEP Neighborhood
MF GO:0005542 folic acid binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
MF GO:0008517 folic acid transmembrane transporter activity IEP Neighborhood
MF GO:0008518 folate:anion antiporter activity IEP Neighborhood
MF GO:0015301 anion:anion antiporter activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0042887 amide transmembrane transporter activity IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
MF GO:0072349 modified amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0090482 vitamin transmembrane transporter activity IEP Neighborhood
MF GO:0099516 ion antiporter activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!