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  5. AMTR_s00003p00256370

AMTR_s00003p00256370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.316

Description : Chromatin organisation.histones.H4-type histone


Gene families : OG0000170 (Archaeplastida) Phylogenetic Tree(s): OG0000170_tree ,
OG_05_0000135 (LandPlants) Phylogenetic Tree(s): OG_05_0000135_tree ,
OG_06_0000106 (SeedPlants) Phylogenetic Tree(s): OG_06_0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00256370
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00186150 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
AT3G45930 No alias Histone superfamily protein 0.03 Archaeplastida
AT3G53730 No alias Histone superfamily protein 0.04 Archaeplastida
Gb_10373 No alias histone (H4) 0.02 Archaeplastida
Gb_15458 No alias histone (H4) 0.03 Archaeplastida
Gb_21914 No alias histone (H4) 0.04 Archaeplastida
Mp5g22460.1 No alias histone (H4) 0.01 Archaeplastida
Mp5g22470.1 No alias histone (H4) 0.01 Archaeplastida
Solyc04g011390.1.1 No alias histone (H4) 0.04 Archaeplastida
Solyc06g005420.1.1 No alias histone (H4) 0.05 Archaeplastida
Solyc06g072240.1.1 No alias histone (H4) 0.05 Archaeplastida
Solyc06g075830.2.1 No alias histone (H4) 0.04 Archaeplastida
Solyc06g075960.1.1 No alias histone (H4) 0.06 Archaeplastida
Solyc11g066160.1.1 No alias histone (H4) 0.05 Archaeplastida
Solyc11g072840.1.1 No alias histone (H4) 0.03 Archaeplastida
Solyc11g072860.2.1 No alias histone (H4) 0.03 Archaeplastida
Zm00001e016816_P001 No alias histone (H4) 0.03 Archaeplastida
Zm00001e027269_P001 No alias histone (H4) 0.02 Archaeplastida
Zm00001e034964_P001 No alias histone (H4) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 28 94
No external refs found!