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  5. LOC_Os03g18680.1

LOC_Os03g18680.1


Description : CASP-like protein 4B2 OS=Oryza sativa subsp. japonica (sp|q10mr5|cspln_orysj : 180.0)


Gene families : OG0002323 (Archaeplastida) Phylogenetic Tree(s): OG0002323_tree ,
OG_05_0001530 (LandPlants) Phylogenetic Tree(s): OG_05_0001530_tree ,
OG_06_0001208 (SeedPlants) Phylogenetic Tree(s): OG_06_0001208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g18680.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00090030 evm_27.TU.AmTr_v1... CASP-like protein 4B1 OS=Sorghum bicolor 0.03 Archaeplastida
Mp1g09310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e011777_P001 No alias CASP-like protein 4B3 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e027958_P002 No alias CASP-like protein 4U1 OS=Zea mays (sp|b6uby6|csplg_maize : 411.0) 0.04 Archaeplastida
Zm00001e038388_P001 No alias CASP-like protein 4B1 OS=Sorghum bicolor... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 58 187
No external refs found!