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  5. LOC_Os03g19480.1

LOC_Os03g19480.1


Description : catalytic component CLF|SWN|MEA of VRN/FIS/EMF core complexes. class I/Ez histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0002279 (Archaeplastida) Phylogenetic Tree(s): OG0002279_tree ,
OG_05_0001849 (LandPlants) Phylogenetic Tree(s): OG_05_0001849_tree ,
OG_06_0001954 (SeedPlants) Phylogenetic Tree(s): OG_06_0001954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g19480.1
Cluster HCCA: Cluster_314

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01028124001 No alias Chromatin organisation.histone modifications.histone... 0.05 Archaeplastida
GSVIVT01028125001 No alias Chromatin organisation.histone modifications.histone... 0.04 Archaeplastida
Gb_27681 No alias catalytic component CLF|SWN|MEA of VRN/FIS/EMF core... 0.04 Archaeplastida
Zm00001e038328_P003 No alias catalytic component CLF|SWN|MEA of VRN/FIS/EMF core... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001214 SET_dom 758 861
No external refs found!