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  5. LOC_Os03g20340.1

LOC_Os03g20340.1


Description : regulatory subunit beta of SNF1-related SnRK1 kinase complex. regulatory subunit beta of SnRK1 kinase complex


Gene families : OG0000952 (Archaeplastida) Phylogenetic Tree(s): OG0000952_tree ,
OG_05_0001859 (LandPlants) Phylogenetic Tree(s): OG_05_0001859_tree ,
OG_06_0002296 (SeedPlants) Phylogenetic Tree(s): OG_06_0002296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g20340.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Pp3c12_8780V3.1 No alias 5\-AMP-activated protein kinase beta-2 subunit protein 0.02 Archaeplastida
Pp3c4_19530V3.1 No alias 5\-AMP-activated protein kinase beta-2 subunit protein 0.02 Archaeplastida
Smo170984 No alias Multi-process regulation.SnRK1 metabolic regulator... 0.03 Archaeplastida
Zm00001e018410_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038301_P001 No alias regulatory subunit beta of SNF1-related SnRK1 kinase... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
CC GO:0070652 HAUS complex IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 112 191
IPR006828 ASC_dom 225 292
No external refs found!