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  5. LOC_Os03g20640.1

LOC_Os03g20640.1


Description : no hits & (original description: none)


Gene families : OG0006055 (Archaeplastida) Phylogenetic Tree(s): OG0006055_tree ,
OG_05_0006009 (LandPlants) Phylogenetic Tree(s): OG_05_0006009_tree ,
OG_06_0006358 (SeedPlants) Phylogenetic Tree(s): OG_06_0006358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g20640.1
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00041820 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
GSVIVT01036080001 No alias No description available 0.09 Archaeplastida
Gb_29637 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_184188g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_6489281g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo103361 No alias No description available 0.02 Archaeplastida
Solyc11g068680.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e001515_P004 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038285_P001 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!