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  5. LOC_Os03g22370.1

LOC_Os03g22370.1


Description : component PsbX of PS-II complex


Gene families : OG0004571 (Archaeplastida) Phylogenetic Tree(s): OG0004571_tree ,
OG_05_0003712 (LandPlants) Phylogenetic Tree(s): OG_05_0003712_tree ,
OG_06_0005450 (SeedPlants) Phylogenetic Tree(s): OG_06_0005450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g22370.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00218080 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.14 Archaeplastida
AT2G06520 PSBX photosystem II subunit X 0.18 Archaeplastida
GSVIVT01035449001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.08 Archaeplastida
Gb_07296 No alias component PsbX of PS-II complex 0.08 Archaeplastida
Gb_14525 No alias component PsbX of PS-II complex 0.04 Archaeplastida
MA_464043g0010 No alias component PsbX of PS-II complex 0.07 Archaeplastida
Mp6g21460.1 No alias component PsbX of PS-II complex 0.15 Archaeplastida
Pp3c11_23670V3.1 No alias photosystem II subunit X 0.08 Archaeplastida
Pp3c1_32200V3.1 No alias photosystem II subunit X 0.12 Archaeplastida
Pp3c5_17290V3.1 No alias photosystem II subunit X 0.12 Archaeplastida
Pp3c6_15360V3.1 No alias photosystem II subunit X 0.13 Archaeplastida
Solyc05g025600.1.1 No alias component PsbX of PS-II complex 0.19 Archaeplastida
Solyc12g150101.1.1 No alias component PsbX of PS-II complex 0.06 Archaeplastida
Zm00001e025856_P001 No alias component PsbX of PS-II complex 0.2 Archaeplastida
Zm00001e035834_P001 No alias component PsbX of PS-II complex 0.09 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015995 chlorophyll biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR009518 PSII_PsbX 92 128
No external refs found!