- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : transcription factor (BBX-CO)
Gene families : OG0011029 (Archaeplastida) Phylogenetic Tree(s): OG0011029_tree ,
OG_05_0009088 (LandPlants) Phylogenetic Tree(s): OG_05_0009088_tree ,
OG_06_0003347 (SeedPlants) Phylogenetic Tree(s): OG_06_0003347_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os03g22770.1 | |
| Cluster | HCCA: Cluster_180 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Zm00001e001660_P002 | No alias | Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004497 | monooxygenase activity | IEP | Neighborhood |
| MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Neighborhood |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Neighborhood |
| BP | GO:0006101 | citrate metabolic process | IEP | Neighborhood |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Neighborhood |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Neighborhood |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | Neighborhood |
| BP | GO:0015977 | carbon fixation | IEP | Neighborhood |
| CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Neighborhood |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Neighborhood |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Neighborhood |
| BP | GO:0016999 | antibiotic metabolic process | IEP | Neighborhood |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Neighborhood |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010402 | CCT_domain | 358 | 400 |
| No external refs found! |