LOC_Os03g22800.1


Description : transcription factor (TUB)


Gene families : OG0000335 (Archaeplastida) Phylogenetic Tree(s): OG0000335_tree ,
OG_05_0000295 (LandPlants) Phylogenetic Tree(s): OG_05_0000295_tree ,
OG_06_0000341 (SeedPlants) Phylogenetic Tree(s): OG_06_0000341_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g22800.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010999001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
MA_87289g0010 No alias transcription factor (TUB) 0.03 Archaeplastida
Solyc04g071440.3.1 No alias transcription factor (TUB) 0.03 Archaeplastida
Zm00001e001672_P001 No alias transcription factor (TUB) 0.04 Archaeplastida
Zm00001e007472_P001 No alias transcription factor (TUB) 0.03 Archaeplastida
Zm00001e019166_P001 No alias transcription factor (TUB) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR000007 Tubby_C 115 398
IPR001810 F-box_dom 51 101
No external refs found!