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  5. LOC_Os03g22890.2

LOC_Os03g22890.2


Description : NUG2 LSU processome regulatory GTPase


Gene families : OG0005814 (Archaeplastida) Phylogenetic Tree(s): OG0005814_tree ,
OG_05_0005666 (LandPlants) Phylogenetic Tree(s): OG_05_0005666_tree ,
OG_06_0007548 (SeedPlants) Phylogenetic Tree(s): OG_06_0007548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g22890.2
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.42 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
Cre07.g340050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Pp3c1_3230V3.1 No alias GTP-binding family protein 0.05 Archaeplastida
Zm00001e001677_P001 No alias NUG2 LSU processome regulatory GTPase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
InterPro domains Description Start Stop
IPR012971 NOG2_N_dom 51 174
IPR006073 GTP_binding_domain 319 389
No external refs found!