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  5. AMTR_s00003p00264210

AMTR_s00003p00264210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.358

No description available


Gene families : OG0000287 (Archaeplastida) Phylogenetic Tree(s): OG0000287_tree ,
OG_05_0000195 (LandPlants) Phylogenetic Tree(s): OG_05_0000195_tree ,
OG_06_0001887 (SeedPlants) Phylogenetic Tree(s): OG_06_0001887_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00264210
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00178790 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00002p00212250 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT3G19430 No alias late embryogenesis abundant protein-related / LEA protein-related 0.02 Archaeplastida
Gb_00316 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g73700.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g47940.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g05360.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10428258g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6494080g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_6771381g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_74876g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8427244g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8955g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_957739g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c23_2500V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.01 Archaeplastida
Solyc01g107710.2.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc01g107720.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc02g078930.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g034130.2.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc11g069280.2.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc11g073140.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc11g073150.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e002062_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e018525_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e018527_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e021386_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e024129_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e028269_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029686_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR009646 Root_cap 274 325
No external refs found!