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  5. LOC_Os03g25200.1

LOC_Os03g25200.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g25200.1
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g18200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g24530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g29710.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os02g08280.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g25370.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g30080.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os03g54020.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g29440.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g43590.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g27860.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os06g16900.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g19310.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g21000.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os07g17510.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g46120.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os08g03730.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g17120.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g26280.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os09g13560.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os09g15610.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os09g20130.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g20450.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os09g25240.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g07554.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g14350.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os11g17410.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os11g19550.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g23810.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g44100.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g13080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g19210.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g33060.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 Archaeplastida
LOC_Os12g36480.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os12g37240.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 867 980
No external refs found!