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  5. LOC_Os03g26420.1

LOC_Os03g26420.1


Description : no hits & (original description: none)


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0003606 (SeedPlants) Phylogenetic Tree(s): OG_06_0003606_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g26420.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT1G68180 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G13228 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G60080 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00000158.69 No alias No description available 0.03 Archaeplastida
GSVIVT01022973001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os06g08250.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g17610.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e009118_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 114 160
No external refs found!