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  5. LOC_Os03g28310.1

LOC_Os03g28310.1


Description : no hits & (original description: none)


Gene families : OG0000255 (Archaeplastida) Phylogenetic Tree(s): OG0000255_tree ,
OG_05_0000197 (LandPlants) Phylogenetic Tree(s): OG_05_0000197_tree ,
OG_06_0000631 (SeedPlants) Phylogenetic Tree(s): OG_06_0000631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g28310.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT2G05230 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 Archaeplastida
AT2G05250 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 Archaeplastida
GSVIVT01008568001 No alias No description available 0.04 Archaeplastida
GSVIVT01017824001 No alias No description available 0.04 Archaeplastida
Gb_00839 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_17193 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g31940.1 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_10434613g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_137848g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_96489g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g27530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c17_2560V3.1 No alias DNAJ heat shock N-terminal domain-containing protein 0.07 Archaeplastida
Solyc01g098250.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc03g007280.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc03g019640.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g040050.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e017660_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e025632_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e025633_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e033340_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e040755_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e041002_P001 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 66 127
IPR024593 DUF3444 505 711
No external refs found!