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  5. LOC_Os03g30550.1

LOC_Os03g30550.1


Description : mRNA endoribonuclease (G3BP)


Gene families : OG0000605 (Archaeplastida) Phylogenetic Tree(s): OG0000605_tree ,
OG_05_0021080 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0020295 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g30550.1
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AT1G13730 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.05 Archaeplastida
Gb_35692 No alias mRNA endoribonuclease (G3BP) 0.03 Archaeplastida
Solyc09g059310.3.1 No alias mRNA endoribonuclease (G3BP) 0.02 Archaeplastida
Zm00001e008436_P002 No alias mRNA endoribonuclease (G3BP) 0.03 Archaeplastida
Zm00001e014590_P001 No alias mRNA endoribonuclease (G3BP) 0.04 Archaeplastida
Zm00001e038048_P001 No alias mRNA endoribonuclease (G3BP) 0.02 Archaeplastida
Zm00001e040697_P001 No alias mRNA endoribonuclease (G3BP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006474 N-terminal protein amino acid acetylation IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018206 peptidyl-methionine modification IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Neighborhood
CC GO:0031417 NatC complex IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002075 NTF2 19 133
IPR000504 RRM_dom 302 360
No external refs found!