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  5. LOC_Os03g32100.1

LOC_Os03g32100.1


Description : U-box domain-containing protein 4 OS=Arabidopsis thaliana (sp|o22193|pub4_arath : 130.0)


Gene families : OG0003211 (Archaeplastida) Phylogenetic Tree(s): OG0003211_tree ,
OG_05_0002427 (LandPlants) Phylogenetic Tree(s): OG_05_0002427_tree ,
OG_06_0001492 (SeedPlants) Phylogenetic Tree(s): OG_06_0001492_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g32100.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00031680 evm_27.TU.AmTr_v1... U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01009347001 No alias U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_8739g0010 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.02 Archaeplastida
Solyc04g014810.3.1 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.02 Archaeplastida
Solyc12g088360.2.1 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000225 Armadillo 125 163
IPR000225 Armadillo 82 121
IPR000225 Armadillo 172 205
No external refs found!