1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g40580.1

LOC_Os03g40580.1


Description : no hits & (original description: none)


Gene families : OG0000596 (Archaeplastida) Phylogenetic Tree(s): OG0000596_tree ,
OG_05_0000323 (LandPlants) Phylogenetic Tree(s): OG_05_0000323_tree ,
OG_06_0000139 (SeedPlants) Phylogenetic Tree(s): OG_06_0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g40580.1
Cluster HCCA: Cluster_320

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g33690.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g11290.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g11610.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g19890.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g14610.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g19990.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os08g24130.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os08g28250.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g01870.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g16470.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os11g14840.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g28230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g10000.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!