- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : transcription factor (AS2/LOB)
Gene families : OG0000724 (Archaeplastida) Phylogenetic Tree(s): OG0000724_tree ,
OG_05_0000483 (LandPlants) Phylogenetic Tree(s): OG_05_0000483_tree ,
OG_06_0000437 (SeedPlants) Phylogenetic Tree(s): OG_06_0000437_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os03g41330.1 | |
| Cluster | HCCA: Cluster_294 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00079p00088960 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | Archaeplastida | |
| AT1G68510 | LBD42 | LOB domain-containing protein 42 | 0.03 | Archaeplastida | |
| AT3G49940 | LBD38 | LOB domain-containing protein 38 | 0.06 | Archaeplastida | |
| AT4G37540 | LBD39 | LOB domain-containing protein 39 | 0.03 | Archaeplastida | |
| GSVIVT01000141001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | Archaeplastida | |
| GSVIVT01009360001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | Archaeplastida | |
| Gb_10825 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Gb_36943 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| MA_19934g0010 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| MA_73565g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| Pp3c5_6300V3.1 | No alias | LOB domain-containing protein 37 | 0.02 | Archaeplastida | |
| Solyc01g107190.3.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Solyc02g085910.4.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Solyc05g009320.4.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Zm00001e001981_P001 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Zm00001e005129_P001 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Neighborhood |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
| MF | GO:0005244 | voltage-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Neighborhood |
| MF | GO:0005253 | anion channel activity | IEP | Neighborhood |
| MF | GO:0005254 | chloride channel activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006811 | ion transport | IEP | Neighborhood |
| BP | GO:0006820 | anion transport | IEP | Neighborhood |
| BP | GO:0006821 | chloride transport | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | Neighborhood |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
| MF | GO:0010181 | FMN binding | IEP | Neighborhood |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015267 | channel activity | IEP | Neighborhood |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015698 | inorganic anion transport | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Neighborhood |
| MF | GO:0022836 | gated channel activity | IEP | Neighborhood |
| MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
| MF | GO:0022839 | ion gated channel activity | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0030151 | molybdenum ion binding | IEP | Neighborhood |
| BP | GO:0035556 | intracellular signal transduction | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 2 | 100 |
| No external refs found! |