AMTR_s00003p00271410 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.457

Description : Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I).CcmC component

Gene families : OG0008905 (Archaeplastida) Phylogenetic Tree(s): OG0008905_tree ,
OG_05_0010150 (LandPlants) Phylogenetic Tree(s): OG_05_0010150_tree ,
OG_06_0009053 (SeedPlants) Phylogenetic Tree(s): OG_06_0009053_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00003p00271410
Cluster	HCCA: Cluster_151

Target	Alias	Description	ECC score	Gene Family Method
AT2G07681	No alias	Cytochrome C assembly protein	0.05	Archaeplastida
AT2G07771	No alias	No description available	0.04	Archaeplastida
ATMG00900	CCB256	cytochrome C biogenesis 256	0.04	Archaeplastida
Gb_10329	No alias	component CcmC of CCM cytochrome c maturation system (system I)	0.04	Archaeplastida
Gb_11041	No alias	component CcmC of CCM cytochrome c maturation system (system I)	0.04	Archaeplastida
Gb_34378	No alias	component CcmC of CCM cytochrome c maturation system (system I)	0.04	Archaeplastida
Solyc00g500242.1.1	No alias	component CcmC of CCM cytochrome c maturation system (system I)	0.05	Archaeplastida
Solyc00g500277.1.1	No alias	component CcmC of CCM cytochrome c maturation system (system I)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008535	respiratory chain complex IV assembly	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0017004	cytochrome complex assembly	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003954	NADH dehydrogenase activity	IEP	Neighborhood
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	Neighborhood
MF	GO:0015002	heme-copper terminal oxidase activity	IEP	Neighborhood
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Neighborhood
BP	GO:0022900	electron transport chain	IEP	Neighborhood
BP	GO:0022904	respiratory electron transport chain	IEP	Neighborhood
CC	GO:0031360	intrinsic component of thylakoid membrane	IEP	Neighborhood
CC	GO:0031361	integral component of thylakoid membrane	IEP	Neighborhood
BP	GO:0042773	ATP synthesis coupled electron transport	IEP	Neighborhood
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002541	Cyt_c_assembly	39	120

External Links

No external refs found!