LOC_Os03g42370.1


Description : Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica (sp|q851v5|y3216_orysj : 1194.0)


Gene families : OG0003518 (Archaeplastida) Phylogenetic Tree(s): OG0003518_tree ,
OG_05_0002434 (LandPlants) Phylogenetic Tree(s): OG_05_0002434_tree ,
OG_06_0003097 (SeedPlants) Phylogenetic Tree(s): OG_06_0003097_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g42370.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Zm00001e005100_P001 No alias Putative B3 domain-containing protein Os03g0621600... 0.04 Archaeplastida
Zm00001e005101_P002 No alias Putative B3 domain-containing protein Os03g0621600... 0.04 Archaeplastida
Zm00001e012435_P002 No alias No annotation 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 327 415
IPR003340 B3_DNA-bd 212 286
IPR003340 B3_DNA-bd 24 112
No external refs found!