Description : Pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Arabidopsis thaliana (sp|q9fjy9|pp448_arath : 311.0)
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0014034 (LandPlants) Phylogenetic Tree(s): OG_05_0014034_tree ,
OG_06_0013967 (SeedPlants) Phylogenetic Tree(s): OG_06_0013967_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os03g42650.2 | |
Cluster | HCCA: Cluster_230 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00170p00032020 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | Archaeplastida | |
AT1G05750 | PDE247, CLB19 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT1G08070 | OTP82 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
AT1G59720 | CRR28 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
GSVIVT01000420001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | Archaeplastida | |
GSVIVT01024870001 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | Archaeplastida | |
GSVIVT01030443001 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | Archaeplastida | |
Gb_10113 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | Archaeplastida | |
Gb_18914 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | Archaeplastida | |
Gb_26581 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
Gb_33718 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
Gb_33726 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
Gb_36806 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | Archaeplastida | |
MA_10429069g0010 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | Archaeplastida | |
Smo462 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.03 | Archaeplastida | |
Smo70183 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | Archaeplastida | |
Smo90480 | No alias | Pentatricopeptide repeat-containing protein At3g02330,... | 0.03 | Archaeplastida | |
Solyc09g090220.3.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Zm00001e035764_P001 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
BP | GO:0009314 | response to radiation | IEP | Neighborhood |
BP | GO:0009411 | response to UV | IEP | Neighborhood |
BP | GO:0009416 | response to light stimulus | IEP | Neighborhood |
BP | GO:0009628 | response to abiotic stimulus | IEP | Neighborhood |
MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 235 | 262 |
IPR002885 | Pentatricopeptide_repeat | 170 | 198 |
IPR002885 | Pentatricopeptide_repeat | 39 | 63 |
IPR002885 | Pentatricopeptide_repeat | 264 | 290 |
IPR002885 | Pentatricopeptide_repeat | 301 | 328 |
IPR002885 | Pentatricopeptide_repeat | 139 | 158 |
IPR002885 | Pentatricopeptide_repeat | 339 | 360 |
No external refs found! |