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  5. LOC_Os03g43580.1

LOC_Os03g43580.1


Description : no hits & (original description: none)


Gene families : OG0002180 (Archaeplastida) Phylogenetic Tree(s): OG0002180_tree ,
OG_05_0001388 (LandPlants) Phylogenetic Tree(s): OG_05_0001388_tree ,
OG_06_0000687 (SeedPlants) Phylogenetic Tree(s): OG_06_0000687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g43580.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AT4G14750 IQD19 IQ-domain 19 0.02 Archaeplastida
Zm00001e004758_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e005058_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e016591_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e027119_P003 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 137 151
IPR000048 IQ_motif_EF-hand-BS 112 130
IPR025064 DUF4005 292 386
No external refs found!