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  5. LOC_Os03g43650.1

LOC_Os03g43650.1


Description : LRR-domain extensin


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree ,
OG_06_0000158 (SeedPlants) Phylogenetic Tree(s): OG_06_0000158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g43650.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271610 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.03 Archaeplastida
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.03 Archaeplastida
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 Archaeplastida
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.05 Archaeplastida
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.06 Archaeplastida
AT4G06744 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.07 Archaeplastida
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
GSVIVT01009442001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01018025001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 Archaeplastida
GSVIVT01031700001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Gb_12380 No alias LRR-domain extensin 0.02 Archaeplastida
Gb_29819 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os01g41120.1 No alias LRR-domain extensin 0.07 Archaeplastida
LOC_Os02g04540.1 No alias LRR-domain extensin 0.04 Archaeplastida
LOC_Os04g42620.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.07 Archaeplastida
LOC_Os05g08770.2 No alias LRR-domain extensin 0.05 Archaeplastida
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.03 Archaeplastida
MA_100985g0010 No alias LRR-domain extensin 0.02 Archaeplastida
Pp3c12_22970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
Pp3c8_3600V3.1 No alias leucine-rich repeat/extensin 1 0.04 Archaeplastida
Smo81544 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.08 Archaeplastida
Solyc01g107790.2.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 Archaeplastida
Solyc02g064940.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 Archaeplastida
Solyc04g078560.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g053840.1.1 No alias LRR-domain extensin 0.11 Archaeplastida
Solyc09g082530.3.1 No alias LRR-domain extensin 0.05 Archaeplastida
Solyc10g050110.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Solyc12g006973.1.1 No alias LRR-domain extensin 0.02 Archaeplastida
Zm00001e005974_P001 No alias LRR-domain extensin 0.08 Archaeplastida
Zm00001e011874_P001 No alias LRR-domain extensin 0.06 Archaeplastida
Zm00001e015109_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e020600_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026840_P001 No alias LRR-domain extensin 0.05 Archaeplastida
Zm00001e030216_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e031241_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e041184_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e041899_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 281 300
No external refs found!