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  5. LOC_Os03g43840.1

LOC_Os03g43840.1


Description : LSD/LOL programmed cell death regulator protein


Gene families : OG0002022 (Archaeplastida) Phylogenetic Tree(s): OG0002022_tree ,
OG_05_0001467 (LandPlants) Phylogenetic Tree(s): OG_05_0001467_tree ,
OG_06_0002097 (SeedPlants) Phylogenetic Tree(s): OG_06_0002097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g43840.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AT4G21610 LOL2 lsd one like 2 0.02 Archaeplastida
MA_780983g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g077060.3.1 No alias LSD/LOL programmed cell death regulator protein 0.03 Archaeplastida
Zm00001e005043_P002 No alias LSD/LOL programmed cell death regulator protein 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 86 110
IPR005735 Znf_LSD1 7 31
IPR005735 Znf_LSD1 48 72
No external refs found!