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  5. LOC_Os03g44642.1

LOC_Os03g44642.1


Description : no hits & (original description: none)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0031247 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0029428 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g44642.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00176670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT1G22500 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G43430 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G40070 No alias RING/U-box superfamily protein 0.02 Archaeplastida
GSVIVT01029277001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_20844 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_26582 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_17249g0010 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
MA_51630g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_8362328g0010 No alias Probable E3 ubiquitin-protein ligase XERICO... 0.03 Archaeplastida
Smo137213 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo412607 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc02g083400.3.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e017959_P001 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e030136_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e030877_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e032196_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e036086_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 85 127
No external refs found!