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  5. LOC_Os03g44890.1

LOC_Os03g44890.1


Description : no description available(sp|q9m2r0|ftip3_arath : 732.0)


Gene families : OG0000149 (Archaeplastida) Phylogenetic Tree(s): OG0000149_tree ,
OG_05_0000184 (LandPlants) Phylogenetic Tree(s): OG_05_0000184_tree ,
OG_06_0000152 (SeedPlants) Phylogenetic Tree(s): OG_06_0000152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g44890.1
Cluster HCCA: Cluster_349

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00091660 evm_27.TU.AmTr_v1... Protein QUIRKY OS=Arabidopsis thaliana 0.07 Archaeplastida
AT5G17980 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 Archaeplastida
Gb_20033 No alias no description available(sp|q9m2r0|ftip3_arath : 959.0) 0.03 Archaeplastida
Mp6g00440.1 No alias no description available(sp|q60ew9|ftip7_orysj : 926.0) 0.02 Archaeplastida
Pp3c14_25200V3.1 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.02 Archaeplastida
Pp3c7_19130V3.1 No alias No annotation 0.02 Archaeplastida
Solyc03g113190.1.1 No alias Protein QUIRKY OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc09g064230.3.1 No alias no description available(sp|q9m2r0|ftip3_arath : 978.0) 0.03 Archaeplastida
Solyc10g080430.1.1 No alias no description available(sp|q9m2r0|ftip3_arath : 1369.0) 0.03 Archaeplastida
Zm00001e027004_P001 No alias no description available(sp|q9m2r0|ftip3_arath : 963.0) 0.02 Archaeplastida
Zm00001e027805_P001 No alias Protein QUIRKY OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e030514_P001 No alias no description available(sp|q60ew9|ftip7_orysj : 1482.0) 0.02 Archaeplastida
Zm00001e037594_P001 No alias no description available(sp|q60ew9|ftip7_orysj : 1495.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013583 PRibTrfase_C 899 1054
IPR000008 C2_dom 638 753
IPR000008 C2_dom 471 580
IPR000008 C2_dom 314 409
IPR000008 C2_dom 10 105
No external refs found!